seams_input.hpp File Reference

File for functions that read in files). More...

#include <iostream>
#include <memory>
#include <mol_sys.hpp>
#include <ring.hpp>
#include <string>
#include "boost/filesystem/operations.hpp"
#include "boost/filesystem/path.hpp"

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Namespaces
	sinp
	Functions for the d-SEAMS readers.

Functions
std::vector< std::string >	sinp::getInpFileList (std::string inputFolder)
	Get file list inside the input folder. More...
molSys::PointCloud< molSys::Point< double >, double >	sinp::readLammpsTrj (std::string filename, int targetFrame, molSys::PointCloud< molSys::Point< double >, double > *yCloud, bool isSlice=false, std::array< double, 3 > coordLow=std::array< double, 3 >{0, 0, 0}, std::array< double, 3 > coordHigh=std::array< double, 3 >{0, 0, 0})
molSys::PointCloud< molSys::Point< double >, double >	sinp::readLammpsTrjO (std::string filename, int targetFrame, molSys::PointCloud< molSys::Point< double >, double > *yCloud, int typeO, bool isSlice=false, std::array< double, 3 > coordLow=std::array< double, 3 >{0, 0, 0}, std::array< double, 3 > coordHigh=std::array< double, 3 >{0, 0, 0})
molSys::PointCloud< molSys::Point< double >, double >	sinp::readLammpsTrjreduced (std::string filename, int targetFrame, molSys::PointCloud< molSys::Point< double >, double > *yCloud, int typeI, bool isSlice=false, std::array< double, 3 > coordLow=std::array< double, 3 >{0, 0, 0}, std::array< double, 3 > coordHigh=std::array< double, 3 >{0, 0, 0})
molSys::PointCloud< molSys::Point< double >, double >	sinp::readXYZ (std::string filename)
	Function for reading in atom coordinates from an XYZ file. More...
std::vector< std::vector< int > >	sinp::readBonds (std::string filename)
	Reads bonds into a vector of vectors from a file with a specific format. More...
bool	sinp::atomInSlice (double x, double y, double z, std::array< double, 3 > coordLow, std::array< double, 3 > coordHigh)

Detailed Description

File for functions that read in files).

Definition in file seams_input.hpp.