File List

Here is a list of all files with brief descriptions:

[detail level 1234]

markdown
▼ src
▼ include
▼ internal
absOrientation.hpp
bond.hpp	File for bond-related analyses (hydrogen bonds, bonded atoms for data file write-outs etc.)
bop.hpp	File for the bond order parameter analysis
bulkTUM.hpp	File containing functions used specific to bulk topological unit matching (TUM) criterion
cage.hpp	File for cage types for topological network criteria
cluster.hpp	File for the bond order parameter analysis
franzblau.hpp	File for generating shortest-path rings according to the Franzblau algorithm
generic.hpp	File for containing generic or common functions
mol_sys.hpp	The main molecular system handler
neighbours.hpp	Header file for neighbour list generation
opt_parser.h
order_parameter.hpp
pntCorrespondence.hpp
rdf2d.hpp	File containing functions used to calculate the in-plane radial distribution functions
ring.hpp	File containing common functions used by bulk and confined topological network critera
seams_input.hpp	File for functions that read in files)
seams_output.hpp
selection.hpp	File containing functions used to define 'selections' in a given range, using ring information
shapeMatch.hpp
topo_bulk.hpp	File containing functions used specific to bulk topological network critera
topo_one_dim.hpp	File containing functions used specific to quasi-one-dimensional topological network critera (the prism identification scheme)
topo_two_dim.hpp
absOrientation.cpp
backward.cpp
bond.cpp
bop.cpp
bulkTUM.cpp
cluster.cpp
franzblau.cpp
generic.cpp
main.cpp
mol_sys.cpp
neighbours.cpp
opt_parser.cpp
order_parameter.cpp
pntCorrespondence.cpp
rdf2d.cpp
ring.cpp
seams_input.cpp
seams_output.cpp
selection.cpp
shapeMatch.cpp
topo_bulk.cpp
topo_one_dim.cpp
topo_two_dim.cpp