Citation

If you use this software, cite the methods paper.

Goswami, R.; Goswami, A.; Singh, J. K. d-SEAMS: Deferred Structural Elucidation Analysis for Molecular Simulations. J. Chem. Inf. Model. 2020, 60, 2169–2177. 10.1021/acs.jcim.0c00031 (arXiv:1909.09830).

@Article{Goswami2020,
  author  = {Goswami, Rohit and Goswami, Amrita and Singh, Jayant Kumar},
  title   = {{d-SEAMS}: Deferred Structural Elucidation Analysis for Molecular Simulations},
  journal = {Journal of Chemical Information and Modeling},
  year    = {2020},
  volume  = {60},
  number  = {4},
  pages   = {2169--2177},
  doi     = {10.1021/acs.jcim.0c00031},
}

The v2 engine paper targets Computer Physics Communications. Cite JCIM 2020 until that article has a DOI; then cite both (JCIM for the methods, CPC for the v2 engine).

Related method papers, only when the page uses that method: Nguyen and Molinero 2015 (CHILL+), Moore et al. 2010 (CHILL), ten Wolde et al. 1996 (local bond order).